DROID for XCL

Branch: master

Workflow

1. Edit the Google Sheet
2. Run Update to fetch the latest data, validate it, and rebuild
3. View the validation result tables:
   • General (not species-specific) cell types (general.xlsx)
   • Human cell types (human.xlsx)
   • Mouse cell types (general.xlsx)
4. If the tables were valid, then view the resulting trees:
   • General tree (xcl.owl)
   • Human tree (human-tree.owl)
   • Mouse tree (mouse-tree.owl)

Console

Action "update" started at 2026-02-25T10:17:59.589606 (2026-02-25T10:17:59.589606)

$ make update

rm -f xcl.owl build/XCL_Template.xlsx ontology/dependencies.tsv ontology/general.tsv ontology/human.tsv ontology/mouse.tsv
curl -L -o build/XCL_Template.xlsx "https://docs.google.com/spreadsheets/d/1Ja1IYLWygg3k-beGPRg_uza_8-FPBLzF90WbHkbCi4Q/export?format=xlsx"
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100   413    0   413    0     0   1170      0 --:--:-- --:--:-- --:--:--  1173

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 53425    0 53425    0     0  52235      0 --:--:--  0:00:01 --:--:-- 86169
python3 src/xlsx2tsv.py build/XCL_Template.xlsx dependencies > ontology/dependencies.tsv

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